Pires-daSilva, A., and Parihar, M. (2012). Evo-devo of the germline and somatic gonad in nematodes. Sexual Development (in press).
"The Spider Mite Consortium (among 55 authors). (2011). The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature 479: 487-492"
Chaudhuri, J., Kache, V., Pires-daSilva, A. (2011). Regulation of sexual plasticity in a nematode that produces males, females and hermaphrodites. Current Biology 21: 1548-1551.
Shakes, D., Neva, B., Chaudhuri, J., Huynh, H., Pires-daSilva, A. (2011). Asymmetric spermatocyte divisions as a mechanism for skewed sex ratios. Nature Communications 2, doi: 10.1038/ncomms1160.
Chaudhuri, J., Parihar, M., Pires-daSilva, A. (2011) An introduction to worm lab: from culturing worms to mutagenesis. J Vis Exp 47, doi: 10.3791/2293.
Meik, J. M.; Lawing, M.; Pires-daSilva, A.(2010) Phenotypic evolution in insular speckled rattlesnakes (Viperidae: Crotalus mitchellii). PLoS ONE , 5: e9524.
Long, T.; Pires-daSilva, A. (2009) The snake box: a novel approach for safely restraining venomous snakes. Herpetological Bulletin, 108: 34-35.
Click, A., Savaliya, C., Kienle, S., Herrmann, M. and Pires-daSilva. (2009) Natural variation of outcrossing in the hermaphroditic nematode Pristionchus pacificus. BMC Evolutionary Biology, 9:75.
Meik, J. M., and Pires-daSilva, A. (2009) Evolutionary morphology of the rattlesnake style. BMC Evolutionary Biology, 9:35.
Balastik, M., Ferraguti, F., Pires-daSilva, A., Lee, T.H., Alvarez-Bolado, G., Lu, K.P., Gruss, P. (2008) Deficiency in ubiquitin ligase TRIM2 causes accumulation of neurofilament light chain and neurodegeneration. PNAS 105, 12016-21
Pires-daSilva, A. (2007) Evolution of the control of sexual identity in nematodes. Seminars in Cell & Developmental Biology 18:362-370.
Carvalho, S., Barriere, A., Pires-daSilva, A. (2006) The world of a worm: a framework for Caenorhabditis evolution. EMBO Reports 7: 981-984.
Pires-daSilva, A. (2006) Pristionchus pacificus genetic protocols (July 17, 2006), WormBook, ed. The C. elegans Research Community, WormBook, doi/10.1895/wormbook.1.114.1, http://www.wormbook.org.
Pires-daSilva, A. and Sommer, R. J. (2004) Conservation of the global sex determination gene tra-1 in distantly related nematodes. Genes & Development 18 (10): 1198-1208.
Pires-daSilva, A. and Sommer, R. J. (2003) The evolution of signalling pathways in animal development. Nature Reviews Genetics 4, 39-49.
Srinivasan, J., Sinz, W., Lanz, C., Brand, A., Nandakumar, R., Raddatz, G., Witte, H., Keller, H., Kipping, I., Pires-daSilva, A., Jesse, T., Millare, J., De Both, M., Schuster, S. C. and Sommer, R. J. (2002) A Bacterial Artificial Chromosome-based genetic linkage map of the nematode Pristionchus pacificus. Genetics 162 (1), 129-134.
Srinivasan, J., A. Pires-daSilva, J., Gutierrez, A., Zheng, M., Jungblut, B., Witte, H., Schlak, I. and Sommer, R. J. (2001). Microevolutionary analysis of the nematode genus Pristionchus suggests a recent evolution of redundant developmental mechanisms during vulva formation. Evolution & Development 3, 229-40.
Jungblut B, Pires-daSilva, A., Sommer RJ. (2001) Formation of the egg-laying system in Pristionchus pacificus requires complex interactions between gonadal, mesodermal and epidermal tissues and does not rely on single cell inductions. Development 128 (18):3395-3404
Pires-daSilva, A., Nayernia, K., Engel, W., Torres, M., Stoykova, A., Chowdhury, K. and Gruss, P. (2001). Mice deficient for spermatid perinuclear RNA-binding protein show neurologic, spermatogenic, and sperm morphological abnormalities. Developmental Biology 233, 319-28.
Sommer, R.J., Carmi, I., Eizinger, A., Grandien, K., Junbglut, B., Lee, K.-L., Nguyen, H., Pires-daSilva, A., Schlak, I., Sigrist, C.B., Srinivasan, J. (2000) Pristionchus pacificus: a satellite organism in evolutionary developmental biology. Nematology 2:81-88.
Pires-daSilva, A. and Gruss, P. (1998) Gene trap insertion into a novel gene expressed during mouse limb development. Developmental Dynamics 212: 318-325.